Computing Genome Edit Distances using Domain-Independent Planning

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

    Abstract

    The use of planning for computing genome edit distances was suggested by Erdem and Tillier in 2005, but to date there has been no study of how well domain-independent planners are able to solve this problem. This paper reports on experiments with several PDDL formulations of the problem, using several state-of-the-art planners. The main observations are, first, that the problem formulation that is easiest for planners to deal with is not the obvious one, and, second, that plan quality � in particular consistent and assured plan quality � remains the biggest challenge.
    Original languageEnglish
    Title of host publicationInternational Conference on Automated Planning and Scheduling 2011 proceedings
    EditorsAlan Fern
    Place of PublicationGermany
    PublisherAAAI Press
    Pages7
    EditionPeer Reviewed
    ISBN (Print)9781577355038
    Publication statusPublished - 2011
    EventInternational Conference on Automated Planning and Scheduling (ICAPS 2011) - Freiburg Germany
    Duration: 1 Jan 2012 → …

    Conference

    ConferenceInternational Conference on Automated Planning and Scheduling (ICAPS 2011)
    Period1/01/12 → …
    OtherJune 11-16 2011

    Fingerprint

    Dive into the research topics of 'Computing Genome Edit Distances using Domain-Independent Planning'. Together they form a unique fingerprint.

    Cite this