Crystalline toroidal globules of DNA and other semi-flexible polymers: Jumps in radius caused by hexagonal packing

G. G. Pereira*, D. R.M. Williams

*Corresponding author for this work

    Research output: Contribution to journalArticlepeer-review

    17 Citations (Scopus)

    Abstract

    We study a single semiflexible polymer chain immersed in a poor solvent. Such chains are stiff and are known to form toroidal globules. Here we examine the effects of hexagonally ordered packing of the chains. This packing induces a series of sharp transitions in the circuit number (number of complete circuits of the toroid) and major radius of the torus as a function of chain length. Circuit numbers corresponding to closed shells are strongly favoured and circuit numbers corresponding to a spare loop are forbidden. The potential landscape as a function of the circuit number consists of a series of minima separated by barriers. In some cases these barriers may be high enough to produce long-lived non-equilibrium tori.

    Original languageEnglish
    Pages (from-to)559-564
    Number of pages6
    JournalEurophysics Letters
    Volume50
    Issue number4
    DOIs
    Publication statusPublished - 11 May 2000

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