Ensembl 2004

E. Birney; D. Andrews; P. Bevan; M. Caccamo; G. Cameron; Y. Chen; L. Clarke; G. Coates; T. Cox; J. Cuff; V. Curwen; T. Cutts; T. Down; R. Durbin; E. Eyras; X. M. Fernandez-Suarez; P. Gane; B. Gibbins; J. Gilbert; M. Hammond; H. Hotz; V. Iyer; A. Kahari; K. Jekosch; A. Kasprzyk; D. Keefe; S. Keenan; H. Lehvaslaiho; G. McVicker; C. Melsopp; P. Meidl; E. Mongin; R. Pettett; S. Potter; G. Proctor; M. Rae; S. Searle; G. Slater; D. Smedley; J. Smith; W. Spooner; A. Stabenau; J. Stalker; R. Storey; A. Ureta-Vidal; C. Woodwark; M. Clamp; T. Hubbard

Ensembl 2004

E. Birney, D. Andrews, P. Bevan, M. Caccamo, G. Cameron, Y. Chen, L. Clarke, G. Coates, T. Cox, J. Cuff, V. Curwen, T. Cutts, T. Down, R. Durbin, E. Eyras, X. M. Fernandez-Suarez, P. Gane, B. Gibbins, J. Gilbert, M. HammondH. Hotz, V. Iyer, A. Kahari, K. Jekosch, A. Kasprzyk, D. Keefe, S. Keenan, H. Lehvaslaiho, G. McVicker, C. Melsopp, P. Meidl, E. Mongin, R. Pettett, S. Potter, G. Proctor, M. Rae, S. Searle, G. Slater, D. Smedley, J. Smith, W. Spooner, A. Stabenau, J. Stalker, R. Storey, A. Ureta-Vidal, C. Woodwark, M. Clamp, T. Hubbard^*

^*Corresponding author for this work

Research output: Contribution to journal › Article › peer-review

151 Citations (Scopus)

Abstract

The Ensembl (http://www.ensembl.org/) database project provides a bioinformatics framework to organize biology around the sequences of large genomes. It is a comprehensive and integrated source of annotation of large genome sequences, available via interactive website, web services or flat files. As well as being one of the leading sources of genome annotation, Ensembl is an open source software engineering project to develop a portable system able to handle very large genomes and associated requirements. The facilities of the system range from sequence analysis to data storage and visualization and installations exist around the world both in companies and at academic sites. With a total of nine genome sequences available from Ensembl and more genomes to follow, recent developments have focused mainly on closer integration between genomes and external data.

Original language	English
Pages (from-to)	D468-D470
Journal	Nucleic Acids Research
Volume	32
Issue number	DATABASE ISS.
Publication status	Published - 1 Jan 2004
Externally published	Yes

Cite this

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title = "Ensembl 2004",

abstract = "The Ensembl (http://www.ensembl.org/) database project provides a bioinformatics framework to organize biology around the sequences of large genomes. It is a comprehensive and integrated source of annotation of large genome sequences, available via interactive website, web services or flat files. As well as being one of the leading sources of genome annotation, Ensembl is an open source software engineering project to develop a portable system able to handle very large genomes and associated requirements. The facilities of the system range from sequence analysis to data storage and visualization and installations exist around the world both in companies and at academic sites. With a total of nine genome sequences available from Ensembl and more genomes to follow, recent developments have focused mainly on closer integration between genomes and external data.",

author = "E. Birney and D. Andrews and P. Bevan and M. Caccamo and G. Cameron and Y. Chen and L. Clarke and G. Coates and T. Cox and J. Cuff and V. Curwen and T. Cutts and T. Down and R. Durbin and E. Eyras and Fernandez-Suarez, {X. M.} and P. Gane and B. Gibbins and J. Gilbert and M. Hammond and H. Hotz and V. Iyer and A. Kahari and K. Jekosch and A. Kasprzyk and D. Keefe and S. Keenan and H. Lehvaslaiho and G. McVicker and C. Melsopp and P. Meidl and E. Mongin and R. Pettett and S. Potter and G. Proctor and M. Rae and S. Searle and G. Slater and D. Smedley and J. Smith and W. Spooner and A. Stabenau and J. Stalker and R. Storey and A. Ureta-Vidal and C. Woodwark and M. Clamp and T. Hubbard",

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language = "English",

volume = "32",

pages = "D468--D470",

journal = "Nucleic Acids Research",

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Birney, E, Andrews, D, Bevan, P, Caccamo, M, Cameron, G, Chen, Y, Clarke, L, Coates, G, Cox, T, Cuff, J, Curwen, V, Cutts, T, Down, T, Durbin, R, Eyras, E, Fernandez-Suarez, XM, Gane, P, Gibbins, B, Gilbert, J, Hammond, M, Hotz, H, Iyer, V, Kahari, A, Jekosch, K, Kasprzyk, A, Keefe, D, Keenan, S, Lehvaslaiho, H, McVicker, G, Melsopp, C, Meidl, P, Mongin, E, Pettett, R, Potter, S, Proctor, G, Rae, M, Searle, S, Slater, G, Smedley, D, Smith, J, Spooner, W, Stabenau, A, Stalker, J, Storey, R, Ureta-Vidal, A, Woodwark, C, Clamp, M & Hubbard, T 2004, 'Ensembl 2004', Nucleic Acids Research, vol. 32, no. DATABASE ISS., pp. D468-D470.

TY - JOUR

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AU - Birney, E.

AU - Andrews, D.

AU - Bevan, P.

AU - Caccamo, M.

AU - Cameron, G.

AU - Chen, Y.

AU - Clarke, L.

AU - Coates, G.

AU - Cox, T.

AU - Cuff, J.

AU - Curwen, V.

AU - Cutts, T.

AU - Down, T.

AU - Durbin, R.

AU - Eyras, E.

AU - Fernandez-Suarez, X. M.

AU - Gane, P.

AU - Gibbins, B.

AU - Gilbert, J.

AU - Hammond, M.

AU - Hotz, H.

AU - Iyer, V.

AU - Kahari, A.

AU - Jekosch, K.

AU - Kasprzyk, A.

AU - Keefe, D.

AU - Keenan, S.

AU - Lehvaslaiho, H.

AU - McVicker, G.

AU - Melsopp, C.

AU - Meidl, P.

AU - Mongin, E.

AU - Pettett, R.

AU - Potter, S.

AU - Proctor, G.

AU - Rae, M.

AU - Searle, S.

AU - Slater, G.

AU - Smedley, D.

AU - Smith, J.

AU - Spooner, W.

AU - Stabenau, A.

AU - Stalker, J.

AU - Storey, R.

AU - Ureta-Vidal, A.

AU - Woodwark, C.

AU - Clamp, M.

AU - Hubbard, T.

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AB - The Ensembl (http://www.ensembl.org/) database project provides a bioinformatics framework to organize biology around the sequences of large genomes. It is a comprehensive and integrated source of annotation of large genome sequences, available via interactive website, web services or flat files. As well as being one of the leading sources of genome annotation, Ensembl is an open source software engineering project to develop a portable system able to handle very large genomes and associated requirements. The facilities of the system range from sequence analysis to data storage and visualization and installations exist around the world both in companies and at academic sites. With a total of nine genome sequences available from Ensembl and more genomes to follow, recent developments have focused mainly on closer integration between genomes and external data.

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M3 - Article

C2 - 14681459

AN - SCOPUS:9144259164

SN - 0305-1048

VL - 32

SP - D468-D470

JO - Nucleic Acids Research

JF - Nucleic Acids Research

IS - DATABASE ISS.

ER -

Ensembl 2004

Abstract

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