Ensembl 2006.

E. Birney; D. Andrews; M. Caccamo; Y. Chen; L. Clarke; G. Coates; T. Cox; F. Cunningham; V. Curwen; T. Cutts; T. Down; R. Durbin; X. M. Fernandez-Suarez; P. Flicek; S. Gräf; M. Hammond; J. Herrero; K. Howe; V. Iyer; K. Jekosch; A. Kähäri; A. Kasprzyk; D. Keefe; F. Kokocinski; E. Kulesha; D. London; I. Longden; C. Melsopp; P. Meidl; B. Overduin; A. Parker; G. Proctor; A. Prlic; M. Rae; D. Rios; S. Redmond; M. Schuster; I. Sealy; S. Searle; J. Severin; G. Slater; D. Smedley; J. Smith; A. Stabenau; J. Stalker; S. Trevanion; A. Ureta-Vidal; J. Vogel; S. White; C. Woodwark; T. J. Hubbard

doi:10.1093/nar/gkj133

Ensembl 2006.

E. Birney^*, D. Andrews, M. Caccamo, Y. Chen, L. Clarke, G. Coates, T. Cox, F. Cunningham, V. Curwen, T. Cutts, T. Down, R. Durbin, X. M. Fernandez-Suarez, P. Flicek, S. Gräf, M. Hammond, J. Herrero, K. Howe, V. Iyer, K. JekoschA. Kähäri, A. Kasprzyk, D. Keefe, F. Kokocinski, E. Kulesha, D. London, I. Longden, C. Melsopp, P. Meidl, B. Overduin, A. Parker, G. Proctor, A. Prlic, M. Rae, D. Rios, S. Redmond, M. Schuster, I. Sealy, S. Searle, J. Severin, G. Slater, D. Smedley, J. Smith, A. Stabenau, J. Stalker, S. Trevanion, A. Ureta-Vidal, J. Vogel, S. White, C. Woodwark, T. J. Hubbard

^*Corresponding author for this work

Research output: Contribution to journal › Article › peer-review

331 Citations (Scopus)

Abstract

The Ensembl (http://www.ensembl.org/) project provides a comprehensive and integrated source of annotation of large genome sequences. Over the last year the number of genomes available from the Ensembl site has increased from 4 to 19, with the addition of the mammalian genomes of Rhesus macaque and Opossum, the chordate genome of Ciona intestinalis and the import and integration of the yeast genome. The year has also seen extensive improvements to both data analysis and presentation, with the introduction of a redesigned website, the addition of RNA gene and regulatory annotation and substantial improvements to the integration of human genome variation data.

Original language	English
Pages (from-to)	D556-561
Journal	Nucleic Acids Research
Volume	34
Issue number	Database issue
DOIs	https://doi.org/10.1093/nar/gkj133
Publication status	Published - 1 Jan 2006

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10.1093/nar/gkj133

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title = "Ensembl 2006.",

abstract = "The Ensembl (http://www.ensembl.org/) project provides a comprehensive and integrated source of annotation of large genome sequences. Over the last year the number of genomes available from the Ensembl site has increased from 4 to 19, with the addition of the mammalian genomes of Rhesus macaque and Opossum, the chordate genome of Ciona intestinalis and the import and integration of the yeast genome. The year has also seen extensive improvements to both data analysis and presentation, with the introduction of a redesigned website, the addition of RNA gene and regulatory annotation and substantial improvements to the integration of human genome variation data.",

author = "E. Birney and D. Andrews and M. Caccamo and Y. Chen and L. Clarke and G. Coates and T. Cox and F. Cunningham and V. Curwen and T. Cutts and T. Down and R. Durbin and Fernandez-Suarez, {X. M.} and P. Flicek and S. Gr{\"a}f and M. Hammond and J. Herrero and K. Howe and V. Iyer and K. Jekosch and A. K{\"a}h{\"a}ri and A. Kasprzyk and D. Keefe and F. Kokocinski and E. Kulesha and D. London and I. Longden and C. Melsopp and P. Meidl and B. Overduin and A. Parker and G. Proctor and A. Prlic and M. Rae and D. Rios and S. Redmond and M. Schuster and I. Sealy and S. Searle and J. Severin and G. Slater and D. Smedley and J. Smith and A. Stabenau and J. Stalker and S. Trevanion and A. Ureta-Vidal and J. Vogel and S. White and C. Woodwark and Hubbard, {T. J.}",

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doi = "10.1093/nar/gkj133",

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Birney, E, Andrews, D, Caccamo, M, Chen, Y, Clarke, L, Coates, G, Cox, T, Cunningham, F, Curwen, V, Cutts, T, Down, T, Durbin, R, Fernandez-Suarez, XM, Flicek, P, Gräf, S, Hammond, M, Herrero, J, Howe, K, Iyer, V, Jekosch, K, Kähäri, A, Kasprzyk, A, Keefe, D, Kokocinski, F, Kulesha, E, London, D, Longden, I, Melsopp, C, Meidl, P, Overduin, B, Parker, A, Proctor, G, Prlic, A, Rae, M, Rios, D, Redmond, S, Schuster, M, Sealy, I, Searle, S, Severin, J, Slater, G, Smedley, D, Smith, J, Stabenau, A, Stalker, J, Trevanion, S, Ureta-Vidal, A, Vogel, J, White, S, Woodwark, C & Hubbard, TJ 2006, 'Ensembl 2006.', Nucleic Acids Research, vol. 34, no. Database issue, pp. D556-561. https://doi.org/10.1093/nar/gkj133

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AU - Andrews, D.

AU - Caccamo, M.

AU - Chen, Y.

AU - Clarke, L.

AU - Coates, G.

AU - Cox, T.

AU - Cunningham, F.

AU - Curwen, V.

AU - Cutts, T.

AU - Down, T.

AU - Durbin, R.

AU - Fernandez-Suarez, X. M.

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AU - Gräf, S.

AU - Hammond, M.

AU - Herrero, J.

AU - Howe, K.

AU - Iyer, V.

AU - Jekosch, K.

AU - Kähäri, A.

AU - Kasprzyk, A.

AU - Keefe, D.

AU - Kokocinski, F.

AU - Kulesha, E.

AU - London, D.

AU - Longden, I.

AU - Melsopp, C.

AU - Meidl, P.

AU - Overduin, B.

AU - Parker, A.

AU - Proctor, G.

AU - Prlic, A.

AU - Rae, M.

AU - Rios, D.

AU - Redmond, S.

AU - Schuster, M.

AU - Sealy, I.

AU - Searle, S.

AU - Severin, J.

AU - Slater, G.

AU - Smedley, D.

AU - Smith, J.

AU - Stabenau, A.

AU - Stalker, J.

AU - Trevanion, S.

AU - Ureta-Vidal, A.

AU - Vogel, J.

AU - White, S.

AU - Woodwark, C.

AU - Hubbard, T. J.

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AB - The Ensembl (http://www.ensembl.org/) project provides a comprehensive and integrated source of annotation of large genome sequences. Over the last year the number of genomes available from the Ensembl site has increased from 4 to 19, with the addition of the mammalian genomes of Rhesus macaque and Opossum, the chordate genome of Ciona intestinalis and the import and integration of the yeast genome. The year has also seen extensive improvements to both data analysis and presentation, with the introduction of a redesigned website, the addition of RNA gene and regulatory annotation and substantial improvements to the integration of human genome variation data.

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U2 - 10.1093/nar/gkj133

DO - 10.1093/nar/gkj133

M3 - Article

SN - 0305-1048

VL - 34

SP - D556-561

JO - Nucleic Acids Research

JF - Nucleic Acids Research

IS - Database issue

ER -

Ensembl 2006.

Abstract

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