TY - JOUR
T1 - Fisher tensors for classifying human epithelial cells
AU - Faraki, Masoud
AU - Harandi, Mehrtash T.
AU - Wiliem, Arnold
AU - Lovell, Brian C.
PY - 2014/7
Y1 - 2014/7
N2 - Analyzing and classifying Human Epithelial type 2 (HEp-2) cells using Indirect Immunofluorescence protocol has been the golden standard for detecting connective tissue diseases such as Rheumatoid Arthritis. However, this suffers from numerous shortcomings such as being subjective as well as time and labor intensive. Recently, several studies explore the advantages of artificial systems to automate the process, not only to reduce the test turn-around time but also to deliver more consistent results. In this paper, we extend the conventional bag of word models from Euclidean space to non-Euclidean Riemannian manifolds and utilize them to classify the HEp-2 cells. The main motivation comes from the observation that HEp-2 cells can be efficiently described by symmetric positive definite matrices which lie on a Riemannian manifold. With this motivation, we first discuss an intrinsic bag of Riemannian words model. We then propose Fisher tensors which can in turn encode additional information about the distribution of the signatures in a bag of word model. Experiments on two challenging HEp-2 images datasets, namely ICPRContest and SNPHEp-2 show that the proposed methods obtain notable improvements in discrimination accuracy, in comparison to baseline and several state-of-the-art methods. The proposed framework, while hand-crafted towards cell classification, is a generic framework for object recognition. This is supported by assessing the performance of our proposal on a challenging texture classification task.
AB - Analyzing and classifying Human Epithelial type 2 (HEp-2) cells using Indirect Immunofluorescence protocol has been the golden standard for detecting connective tissue diseases such as Rheumatoid Arthritis. However, this suffers from numerous shortcomings such as being subjective as well as time and labor intensive. Recently, several studies explore the advantages of artificial systems to automate the process, not only to reduce the test turn-around time but also to deliver more consistent results. In this paper, we extend the conventional bag of word models from Euclidean space to non-Euclidean Riemannian manifolds and utilize them to classify the HEp-2 cells. The main motivation comes from the observation that HEp-2 cells can be efficiently described by symmetric positive definite matrices which lie on a Riemannian manifold. With this motivation, we first discuss an intrinsic bag of Riemannian words model. We then propose Fisher tensors which can in turn encode additional information about the distribution of the signatures in a bag of word model. Experiments on two challenging HEp-2 images datasets, namely ICPRContest and SNPHEp-2 show that the proposed methods obtain notable improvements in discrimination accuracy, in comparison to baseline and several state-of-the-art methods. The proposed framework, while hand-crafted towards cell classification, is a generic framework for object recognition. This is supported by assessing the performance of our proposal on a challenging texture classification task.
KW - Bag of visual words
KW - Fisher vectors
KW - Human Epithelial Cell Type 2 (HEp-2)
KW - Region covariance descriptor
KW - Riemannian manifolds
KW - Texture classification
UR - http://www.scopus.com/inward/record.url?scp=84897110128&partnerID=8YFLogxK
U2 - 10.1016/j.patcog.2013.10.011
DO - 10.1016/j.patcog.2013.10.011
M3 - Article
SN - 0031-3203
VL - 47
SP - 2348
EP - 2359
JO - Pattern Recognition
JF - Pattern Recognition
IS - 7
ER -