Persistent homology transform for modeling shapes and surfaces

Katharine Turner*, Sayan Mukherjee, Doug M. Boyer

*Corresponding author for this work

Research output: Contribution to journalArticlepeer-review

116 Citations (Scopus)

Abstract

We introduce a statistic, the persistent homology transform (PHT), to model surfaces in R3 and shapes in R2. This statistic is a collection of persistence diagrams-multiscale topological summaries used extensively in topological data analysis. We use the PHT to represent shapes and execute operations such as computing distances between shapes or classifying shapes. We provide a constructive proof that the map from the space of simplicial complexes in R3 into the space spanned by this statistic is injective. This implies that we can use it to determine a metric on the space of piecewise linear shapes. Stability results justify that we can approximate this metric using finitely many persistence diagrams. We illustrate the utility of this statistic on simulated and real data.

Original languageEnglish
Pages (from-to)310-344
Number of pages35
JournalInformation and Inference
Volume3
Issue number4
DOIs
Publication statusPublished - 1 Dec 2014
Externally publishedYes

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