Plasticity of animal genome architecture unmasked by rapid evolution of a pelagic tunicate

France Denoeud; Simon Henriet; Sutada Mungpakdee; Jean Marc Aury; Corinne Da Silva; Henner Brinkmann; Jana Mikhaleva; Lisbeth Charlotte Olsen; Claire Jubin; Cristian Cañestro; Jean Marie Bouquet; Gemma Danks; Julie Poulain; Coen Campsteijn; Marcin Adamski; Ismael Cross; Fekadu Yadetie; Matthieu Muffato; Alexandra Louis; Stephen Butcher; Georgia Tsagkogeorga; Anke Konrad; Sarabdeep Singh; Marit Flo Jensen; Evelyne Huynh Cong; Helen Eikeseth-Otteraa; Benjamin Noel; Véronique Anthouard; Betina M. Porcel; Rym Kachouri-Lafond; Atsuo Nishino; Matteo Ugolini; Pascal Chourrout; Hiroki Nishida; Rein Aasland; Snehalata Huzurbazar; Eric Westhof; Frédéric Delsuc; Hans Lehrach; Richard Reinhardt; Jean Weissenbach; Scott W. Roy; François Artiguenave; John H. Postlethwait; J. Robert Manak; Eric M. Thompson; Olivier Jaillon; Louis Du Pasquier; Pierre Boudinot; David A. Liberles; Jean Nicolas Volff; Hervé Philippe; Boris Lenhard; Hugues Roest Crollius; Patrick Wincker; Daniel Chourrout

doi:10.1126/science.1194167

Plasticity of animal genome architecture unmasked by rapid evolution of a pelagic tunicate

France Denoeud, Simon Henriet, Sutada Mungpakdee, Jean Marc Aury, Corinne Da Silva, Henner Brinkmann, Jana Mikhaleva, Lisbeth Charlotte Olsen, Claire Jubin, Cristian Cañestro, Jean Marie Bouquet, Gemma Danks, Julie Poulain, Coen Campsteijn, Marcin Adamski, Ismael Cross, Fekadu Yadetie, Matthieu Muffato, Alexandra Louis, Stephen ButcherGeorgia Tsagkogeorga, Anke Konrad, Sarabdeep Singh, Marit Flo Jensen, Evelyne Huynh Cong, Helen Eikeseth-Otteraa, Benjamin Noel, Véronique Anthouard, Betina M. Porcel, Rym Kachouri-Lafond, Atsuo Nishino, Matteo Ugolini, Pascal Chourrout, Hiroki Nishida, Rein Aasland, Snehalata Huzurbazar, Eric Westhof, Frédéric Delsuc, Hans Lehrach, Richard Reinhardt, Jean Weissenbach, Scott W. Roy, François Artiguenave, John H. Postlethwait, J. Robert Manak, Eric M. Thompson, Olivier Jaillon, Louis Du Pasquier, Pierre Boudinot, David A. Liberles, Jean Nicolas Volff, Hervé Philippe, Boris Lenhard, Hugues Roest Crollius, Patrick Wincker^*, Daniel Chourrout

^*Corresponding author for this work

Research output: Contribution to journal › Article › peer-review

231 Citations (Scopus)

Abstract

Genomes of animals as different as sponges and humans show conservation of global architecture. Here we show that multiple genomic features including transposon diversity, developmental gene repertoire, physical gene order, and intron-exon organization are shattered in the tunicate Oikopleura, belonging to the sister group of vertebrates and retaining chordate morphology. Ancestral architecture of animal genomes can be deeply modified and may therefore be largely nonadaptive. This rapidly evolving animal lineage thus offers unique perspectives on the level of genome plasticity. It also illuminates issues as fundamental as the mechanisms of intron gain.

Original language	English
Pages (from-to)	1381-1385
Number of pages	5
Journal	Science
Volume	330
Issue number	6009
DOIs	https://doi.org/10.1126/science.1194167
Publication status	Published - 3 Dec 2010
Externally published	Yes

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Denoeud, F., Henriet, S., Mungpakdee, S., Aury, J. M., Da Silva, C., Brinkmann, H., Mikhaleva, J., Olsen, L. C., Jubin, C., Cañestro, C., Bouquet, J. M., Danks, G., Poulain, J., Campsteijn, C., Adamski, M., Cross, I., Yadetie, F., Muffato, M., Louis, A., ... Chourrout, D. (2010). Plasticity of animal genome architecture unmasked by rapid evolution of a pelagic tunicate. Science, 330(6009), 1381-1385. https://doi.org/10.1126/science.1194167

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title = "Plasticity of animal genome architecture unmasked by rapid evolution of a pelagic tunicate",

abstract = "Genomes of animals as different as sponges and humans show conservation of global architecture. Here we show that multiple genomic features including transposon diversity, developmental gene repertoire, physical gene order, and intron-exon organization are shattered in the tunicate Oikopleura, belonging to the sister group of vertebrates and retaining chordate morphology. Ancestral architecture of animal genomes can be deeply modified and may therefore be largely nonadaptive. This rapidly evolving animal lineage thus offers unique perspectives on the level of genome plasticity. It also illuminates issues as fundamental as the mechanisms of intron gain.",

author = "France Denoeud and Simon Henriet and Sutada Mungpakdee and Aury, {Jean Marc} and {Da Silva}, Corinne and Henner Brinkmann and Jana Mikhaleva and Olsen, {Lisbeth Charlotte} and Claire Jubin and Cristian Ca{\~n}estro and Bouquet, {Jean Marie} and Gemma Danks and Julie Poulain and Coen Campsteijn and Marcin Adamski and Ismael Cross and Fekadu Yadetie and Matthieu Muffato and Alexandra Louis and Stephen Butcher and Georgia Tsagkogeorga and Anke Konrad and Sarabdeep Singh and Jensen, {Marit Flo} and Cong, {Evelyne Huynh} and Helen Eikeseth-Otteraa and Benjamin Noel and V{\'e}ronique Anthouard and Porcel, {Betina M.} and Rym Kachouri-Lafond and Atsuo Nishino and Matteo Ugolini and Pascal Chourrout and Hiroki Nishida and Rein Aasland and Snehalata Huzurbazar and Eric Westhof and Fr{\'e}d{\'e}ric Delsuc and Hans Lehrach and Richard Reinhardt and Jean Weissenbach and Roy, {Scott W.} and Fran{\c c}ois Artiguenave and Postlethwait, {John H.} and Manak, {J. Robert} and Thompson, {Eric M.} and Olivier Jaillon and {Du Pasquier}, Louis and Pierre Boudinot and Liberles, {David A.} and Volff, {Jean Nicolas} and Herv{\'e} Philippe and Boris Lenhard and Crollius, {Hugues Roest} and Patrick Wincker and Daniel Chourrout",

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doi = "10.1126/science.1194167",

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Denoeud, F, Henriet, S, Mungpakdee, S, Aury, JM, Da Silva, C, Brinkmann, H, Mikhaleva, J, Olsen, LC, Jubin, C, Cañestro, C, Bouquet, JM, Danks, G, Poulain, J, Campsteijn, C, Adamski, M, Cross, I, Yadetie, F, Muffato, M, Louis, A, Butcher, S, Tsagkogeorga, G, Konrad, A, Singh, S, Jensen, MF, Cong, EH, Eikeseth-Otteraa, H, Noel, B, Anthouard, V, Porcel, BM, Kachouri-Lafond, R, Nishino, A, Ugolini, M, Chourrout, P, Nishida, H, Aasland, R, Huzurbazar, S, Westhof, E, Delsuc, F, Lehrach, H, Reinhardt, R, Weissenbach, J, Roy, SW, Artiguenave, F, Postlethwait, JH, Manak, JR, Thompson, EM, Jaillon, O, Du Pasquier, L, Boudinot, P, Liberles, DA, Volff, JN, Philippe, H, Lenhard, B, Crollius, HR, Wincker, P & Chourrout, D 2010, 'Plasticity of animal genome architecture unmasked by rapid evolution of a pelagic tunicate', Science, vol. 330, no. 6009, pp. 1381-1385. https://doi.org/10.1126/science.1194167

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AU - Denoeud, France

AU - Henriet, Simon

AU - Mungpakdee, Sutada

AU - Aury, Jean Marc

AU - Da Silva, Corinne

AU - Brinkmann, Henner

AU - Mikhaleva, Jana

AU - Olsen, Lisbeth Charlotte

AU - Jubin, Claire

AU - Cañestro, Cristian

AU - Bouquet, Jean Marie

AU - Danks, Gemma

AU - Poulain, Julie

AU - Campsteijn, Coen

AU - Adamski, Marcin

AU - Cross, Ismael

AU - Yadetie, Fekadu

AU - Muffato, Matthieu

AU - Louis, Alexandra

AU - Butcher, Stephen

AU - Tsagkogeorga, Georgia

AU - Konrad, Anke

AU - Singh, Sarabdeep

AU - Jensen, Marit Flo

AU - Cong, Evelyne Huynh

AU - Eikeseth-Otteraa, Helen

AU - Noel, Benjamin

AU - Anthouard, Véronique

AU - Porcel, Betina M.

AU - Kachouri-Lafond, Rym

AU - Nishino, Atsuo

AU - Ugolini, Matteo

AU - Chourrout, Pascal

AU - Nishida, Hiroki

AU - Aasland, Rein

AU - Huzurbazar, Snehalata

AU - Westhof, Eric

AU - Delsuc, Frédéric

AU - Lehrach, Hans

AU - Reinhardt, Richard

AU - Weissenbach, Jean

AU - Roy, Scott W.

AU - Artiguenave, François

AU - Postlethwait, John H.

AU - Manak, J. Robert

AU - Thompson, Eric M.

AU - Jaillon, Olivier

AU - Du Pasquier, Louis

AU - Boudinot, Pierre

AU - Liberles, David A.

AU - Volff, Jean Nicolas

AU - Philippe, Hervé

AU - Lenhard, Boris

AU - Crollius, Hugues Roest

AU - Wincker, Patrick

AU - Chourrout, Daniel

PY - 2010/12/3

Y1 - 2010/12/3

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AB - Genomes of animals as different as sponges and humans show conservation of global architecture. Here we show that multiple genomic features including transposon diversity, developmental gene repertoire, physical gene order, and intron-exon organization are shattered in the tunicate Oikopleura, belonging to the sister group of vertebrates and retaining chordate morphology. Ancestral architecture of animal genomes can be deeply modified and may therefore be largely nonadaptive. This rapidly evolving animal lineage thus offers unique perspectives on the level of genome plasticity. It also illuminates issues as fundamental as the mechanisms of intron gain.

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DO - 10.1126/science.1194167

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VL - 330

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EP - 1385

JO - Science

JF - Science

IS - 6009

ER -

Plasticity of animal genome architecture unmasked by rapid evolution of a pelagic tunicate

Abstract

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